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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3906621_3906702_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3906621 - 3906702

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACCGTGT

5'SS Class:

major

3'SS Sequence:

CTGTTCCCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAG

U12 Branch Point Sequence:

TCAGGCACAAAG

Flanking Amino Acid:

AEEVRKISPKGVDIVLDPLG

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.9

0.4

1.2

61.5

45.6

Major BPS

63.7

0.34

1.6

39.9

Major PPT

74.9

0.56

0.8

66.7

35.6

Minor 5ss

42.9

-0.8

3.5

65.1

46.1

Minor BPS

36.3

-1.1

2.1

38.59

43.9

Associated Gene:

Gene:

VAT1

Ensembl Gene ID:

ENSAPLG00000004079

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004169

3903687 - 3908982

5296