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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3927605_3929170_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3927605 - 3929170

Intron Length:

1566

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCGCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCTAC

U12 Branch Point Sequence:

TCTCTCTTGTCT

Flanking Amino Acid:

PETLDSVLKKWQGETQEFCP

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

44.6

-0.3

1.3

39.5

40.5

Major PPT

72.7

0.51

0.9

65.6

36.1

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

45.5

-0.2

3.4

75.88

41.2

Associated Gene:

Gene:

RND2

Ensembl Gene ID:

ENSAPLG00000027434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029797

3915104 - 3931021

15918