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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3929306_3929580_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3929306 - 3929580

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTCCGGGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAC

U12 Branch Point Sequence:

TCCTCCCCACCT

Flanking Amino Acid:

QRLIPVTHEQGSALARQIGA

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

78.3

32.5

Major BPS

49.9

-0

1.3

60.3

37.5

Major PPT

63.9

0.31

56.7

38.7

Minor 5ss

37.9

-1.4

3.2

51.5

45.7

Minor BPS

47.1

-0.1

2.2

68.62

47.8

Associated Gene:

Gene:

RND2

Ensembl Gene ID:

ENSAPLG00000027434

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029797

3915104 - 3931021

15918