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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3953681_3955104_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3953681 - 3955104

Intron Length:

1424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCAT

5'SS Class:

strong_major

3'SS Sequence:

CTGACTTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATCTTTTTATCT

Flanking Amino Acid:

CYGPFTDMTTGHLEWMVELC

Intron Amino Acid Position:

1738

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

79.7

35.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.6

0.6

0.9

73.3

Minor 5ss

-0.9

2.9

58.1

46.5

Minor BPS

63.2

0.49

1.6

77.22

39.9

Associated Gene:

Gene:

BRCA1

Ensembl Gene ID:

ENSAPLG00000003524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020151

3951206 - 3972643

21438

ENSAPLT00000019034

3951206 - 3973857

22652

ENSAPLT00000003630

3951206 - 3973790

22585