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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3955160_3955576_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3955160 - 3955576

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAGCG

5'SS Class:

major

3'SS Sequence:

CCTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

ACTCTGTTAACA

Flanking Amino Acid:

KRARQSLTEKIFKDFEICCY

Intron Amino Acid Position:

1720

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

56.9

40.7

Major BPS

0.52

1.1

77.7

35.3

Major PPT

86.1

0.81

0.8

83.6

31.4

Minor 5ss

-2.4

3.5

39.3

46.1

Minor BPS

54.1

0.12

2.1

66.52

Associated Gene:

Gene:

BRCA1

Ensembl Gene ID:

ENSAPLG00000003524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020151

3951206 - 3972643

21438

ENSAPLT00000019034

3951206 - 3973857

22652

ENSAPLT00000003630

3951206 - 3973790

22585