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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3964369_3965098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3964369 - 3965098

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACAAACC

5'SS Class:

major

3'SS Sequence:

CATCTCCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

CTATAACTAACT

Flanking Amino Acid:

KDECQEDPNLGEASGYDSET

Intron Amino Acid Position:

1332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

Major BPS

0.45

0.9

67.6

25.3

Major PPT

63.1

0.3

60.2

35.4

Minor 5ss

-1.9

3.2

44.5

Minor BPS

48.5

-0

2.1

72.28

43.7

Associated Gene:

Gene:

BRCA1

Ensembl Gene ID:

ENSAPLG00000003524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020151

3951206 - 3972643

21438

ENSAPLT00000019034

3951206 - 3973857

22652

ENSAPLT00000003630

3951206 - 3973790

22585