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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3965283_3965372_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3965283 - 3965372

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCAGAAA

5'SS Class:

major

3'SS Sequence:

GTTTTCTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGAAT

U12 Branch Point Sequence:

GCTCTGTGAATT

Flanking Amino Acid:

LPRGGSREDKSNVSEESADG

Intron Amino Acid Position:

1271

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

64.4

36.9

Major BPS

59.4

0.24

1.5

69.7

44.2

Major PPT

84.5

0.78

0.8

37.2

Minor 5ss

24.4

-2.9

3.1

43.2

Minor BPS

45.6

-0.2

2.1

62.39

Associated Gene:

Gene:

BRCA1

Ensembl Gene ID:

ENSAPLG00000003524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003630

3951206 - 3973790

22585