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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3968435_3968945_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3968435 - 3968945

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TATAAATCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TAATTCATAATG

Flanking Amino Acid:

AKEIILPNVIGESDFSKEAL

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

29.7

Major BPS

0.75

78.6

Major PPT

72.4

0.5

67.4

43.2

Minor 5ss

46.6

-0.4

2.4

59.3

45.3

Minor BPS

57.6

0.1

1.7

62.21

39.6

Associated Gene:

Gene:

BRCA1

Ensembl Gene ID:

ENSAPLG00000003524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020151

3951206 - 3972643

21438

ENSAPLT00000019034

3951206 - 3973857

22652

ENSAPLT00000003630

3951206 - 3973790

22585