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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3969089_3969578_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3969089 - 3969578

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

ACCTTCCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

TTTCCTTTCACA

Flanking Amino Acid:

EELCKQAGNTGLGNKEVVQI

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

77.9

38.6

Major BPS

68.5

0.46

75.3

29.8

Major PPT

68.4

0.41

0.9

62.7

32.6

Minor 5ss

34.6

-1.7

2.7

34.2

41.4

Minor BPS

68.2

0.57

1.7

80.59

35.2

Associated Gene:

Gene:

BRCA1

Ensembl Gene ID:

ENSAPLG00000003524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020151

3951206 - 3972643

21438

ENSAPLT00000019034

3951206 - 3973857

22652

ENSAPLT00000003630

3951206 - 3973790

22585