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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3969625_3970186_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3969625 - 3970186

Intron Length:

562

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GATTTGTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAC

U12 Branch Point Sequence:

AATCCTTTCACG

Flanking Amino Acid:

DLEKGVFIELGTDSSEELCK

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.8

0.9

74.3

34.1

Major BPS

77.7

0.69

30.2

Major PPT

76.6

0.6

0.9

73.8

41.4

Minor 5ss

33.2

-1.9

3.4

45.7

43.4

Minor BPS

53.8

-0

1.8

60.43

41.3

Associated Gene:

Gene:

BRCA1

Ensembl Gene ID:

ENSAPLG00000003524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020151

3951206 - 3972643

21438

ENSAPLT00000019034

3951206 - 3973857

22652

ENSAPLT00000003630

3951206 - 3973790

22585