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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3970296_3971025_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3970296 - 3971025

Intron Length:

730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATATTT

5'SS Class:

major

3'SS Sequence:

ATTCTCCCATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTATTAATAACT

Flanking Amino Acid:

KENEQENCSLQGANVDAQRA

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

76.2

33.5

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

73.8

0.54

0.9

33.3

Minor 5ss

44.1

-0.6

3.2

62.4

43.3

Minor BPS

60.3

0.4

1.9

83.09

37.2

Associated Gene:

Gene:

BRCA1

Ensembl Gene ID:

ENSAPLG00000003524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020151

3951206 - 3972643

21438

ENSAPLT00000019034

3951206 - 3973857

22652

ENSAPLT00000003630

3951206 - 3973790

22585