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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3972644_3972925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3972644 - 3972925

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTCCACTAAAT

Flanking Amino Acid:

VSTKCDHIFCRFCMYKLLSK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

78.8

38.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

84.4

0.77

0.7

77.6

36.1

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

54.1

0.21

81.57

38.8

Associated Gene:

Gene:

BRCA1

Ensembl Gene ID:

ENSAPLG00000003524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019034

3951206 - 3973857

22652

ENSAPLT00000003630

3951206 - 3973790

22585