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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3972980_3973710_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3972980 - 3973710

Intron Length:

731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTACGGCCG

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

CCTTTTCTATTT

Flanking Amino Acid:

AMQKNLECPICLDVVKEPVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

50.8

45.6

Major BPS

73.8

0.59

1.3

72.8

Major PPT

1.03

0.5

92.7

17.1

Minor 5ss

30.1

-2.3

3.4

36.2

42.8

Minor BPS

46.5

-0.1

1.9

62.98

42.5

Associated Gene:

Gene:

BRCA1

Ensembl Gene ID:

ENSAPLG00000003524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019034

3951206 - 3973857

22652

ENSAPLT00000003630

3951206 - 3973790

22585