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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3974864_3977269_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3974864 - 3977269

Intron Length:

2406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTACTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTTTTCCTAATT

Flanking Amino Acid:

HTTWADVEAMVKVSFDLDNI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

0.9

64.1

41.7

Major BPS

81.9

0.79

0.9

80.1

Major PPT

0.83

0.7

81.5

29.2

Minor 5ss

29.2

-2.4

2.7

30.6

36.2

Minor BPS

74.5

0.85

1.6

92.26

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041040

3974762 - 3991211

16450