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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3978672_3979057_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3978672 - 3979057

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

ATAGGGAAAATT

Flanking Amino Acid:

DKDEVSVNSKEEYEEALKIA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.1

30.7

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

93.3

0.97

0.6

92.4

17.9

Minor 5ss

40.1

-1.1

3.1

49.2

Minor BPS

33.4

-1.1

2.5

51.36

43.5

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041040

3974762 - 3991211

16450

ENSAPLT00000003327

3977099 - 3991211

14113