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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3980147_3980642_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3980147 - 3980642

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCCACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTTAAT

U12 Branch Point Sequence:

ATGTGCTTAATG

Flanking Amino Acid:

LKNEKELAVQQKLNHNRTGR

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.9

Major BPS

69.2

0.48

1.3

71.9

Major PPT

76.9

0.61

0.8

70.5

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

0.24

1.9

65.36

43.1

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003327

3977099 - 3991211

14113

ENSAPLT00000041040

3974762 - 3991211

16450