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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3981341_3981761_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3981341 - 3981761

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATAT

5'SS Class:

strong_major

3'SS Sequence:

TACTGCTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAG

U12 Branch Point Sequence:

CTCTCAGTAACC

Flanking Amino Acid:

ARIVGVRYQCSLCPAYNICE

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

77.7

33.3

Major BPS

58.6

0.22

1.5

38.9

Major PPT

79.4

0.66

0.9

Minor 5ss

38.2

-1.3

3.4

55.2

Minor BPS

49.9

-0

2.3

67.16

44.6

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003327

3977099 - 3991211

14113

ENSAPLT00000041040

3974762 - 3991211

16450