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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3981927_3982405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3981927 - 3982405

Intron Length:

479

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATGGT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATCAGTTTAATA

Flanking Amino Acid:

PRLPATLEQVRLQKQMDKRF

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

78.6

35.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

83.2

0.75

0.7

77.4

24.6

Minor 5ss

33.8

-1.8

3.4

49.7

46.6

Minor BPS

52.1

0.06

1.8

61.74

39.2

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003327

3977099 - 3991211

14113

ENSAPLT00000041040

3974762 - 3991211

16450