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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3984007_3984502_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3984007 - 3984502

Intron Length:

496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTTTC

5'SS Class:

weak_major

3'SS Sequence:

TCGTGTATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAC

U12 Branch Point Sequence:

GTGAAGTTAACT

Flanking Amino Acid:

GNVEWGSDTKLKLMWGNLTL

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

74.9

36.3

Major BPS

65.7

0.39

1.1

67.4

36.7

Major PPT

77.1

0.61

0.9

73.7

40.5

Minor 5ss

72.3

0.75

1.7

78.8

35.5

Minor BPS

48.9

2.3

70.67

45.5

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041040

3974762 - 3991211

16450

ENSAPLT00000003327

3977099 - 3991211

14113