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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3984794_3985242_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3984794 - 3985242

Intron Length:

449

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

ATGTTTTTGAGA

Flanking Amino Acid:

KDKSSSSNKQVASLKTEGDA

Intron Amino Acid Position:

483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.3

1.16

0.7

90.9

28.7

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

0.83

0.7

84.9

29.9

Minor 5ss

27.1

-2.6

3.8

41.5

45.1

Minor BPS

53.8

0.11

1.6

63.06

37.8

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041040

3974762 - 3991211

16450

ENSAPLT00000003327

3977099 - 3991211

14113