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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3985957_3986402_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3985957 - 3986402

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CGCTCATTATCT

Flanking Amino Acid:

LERVPHNTPVDMTPCMSPLP

Intron Amino Acid Position:

559

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

84.3

33.3

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

38.3

-1.3

3.4

54.5

43.9

Minor BPS

52.6

0.16

1.9

69.72

46.7

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041040

3974762 - 3991211

16450

ENSAPLT00000003327

3977099 - 3991211

14113