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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3986514_3987020_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3986514 - 3987020

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCCTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TTCCTTTCAAAG

Flanking Amino Acid:

NEGSGFKPVSDACMVKMKGE

Intron Amino Acid Position:

596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

82.5

0.73

0.8

76.5

32.3

Minor 5ss

41.2

-1

2.9

54.6

44.5

Minor BPS

47.8

-0.3

1.7

53.7

41.4

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041040

3974762 - 3991211

16450

ENSAPLT00000003327

3977099 - 3991211

14113