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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3987450_3988023_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3987450 - 3988023

Intron Length:

574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TATGCTTTATTC

Flanking Amino Acid:

QSEAMTENGSGELLFSEKVN

Intron Amino Acid Position:

695

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

79.6

0.67

0.9

81.2

30.8

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

57.5

0.21

1.7

66.86

39.5

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041040

3974762 - 3991211

16450

ENSAPLT00000003327

3977099 - 3991211

14113