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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3988385_3988685_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3988385 - 3988685

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTTATGTTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TTTGCCTTATGT

Flanking Amino Acid:

ETTDTLPQTERNLASLQNCI

Intron Amino Acid Position:

815

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

0.65

0.9

76.3

37.6

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

61.7

0.45

83.49

43.8

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041040

3974762 - 3991211

16450

ENSAPLT00000003327

3977099 - 3991211

14113