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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3988781_3989337_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3988781 - 3989337

Intron Length:

557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGACA

5'SS Class:

major

3'SS Sequence:

TTGCTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TCCATGTTGATA

Flanking Amino Acid:

SSTTHNQIREEPSGEDSHGP

Intron Amino Acid Position:

847

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

66.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

84.9

0.79

0.8

77.2

37.1

Minor 5ss

38.7

-1.3

49.8

46.1

Minor BPS

45.3

-0.3

53.46

39.8

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041040

3974762 - 3991211

16450

ENSAPLT00000003327

3977099 - 3991211

14113