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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3989417_3989804_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3989417 - 3989804

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAAA

5'SS Class:

strong_major

3'SS Sequence:

ATCTTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

GACACCTAAAGT

Flanking Amino Acid:

TRNQKFSEYPRHPQGSSIAG

Intron Amino Acid Position:

873

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

76.8

33.4

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

83.1

0.74

0.8

77.6

30.4

Minor 5ss

31.6

-2.1

3.1

39.6

45.9

Minor BPS

47.8

-0

62.49

46.9

Associated Gene:

Gene:

NBR1

Ensembl Gene ID:

ENSAPLG00000003234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041040

3974762 - 3991211

16450

ENSAPLT00000003327

3977099 - 3991211

14113