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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3997006_3997690_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3997006 - 3997690

Intron Length:

685

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTTTGCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATCCAA

U12 Branch Point Sequence:

GACAATCCAAGT

Flanking Amino Acid:

VRVHNVLLHLQGTLTCTYLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

51.5

0.04

1.2

62.5

34.5

Major PPT

87.2

0.84

0.7

81.4

30.6

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

-1

1.9

44.76

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019572

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017811

3995747 - 3999569

3823