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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4000359_4001770_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4000359 - 4001770

Intron Length:

1412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TTAAATTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGCTTCTTAACA

Flanking Amino Acid:

TTWASTTRIWDSLISNLLRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.1

43.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.5

0.66

0.9

73.4

41.2

Minor 5ss

26.2

-2.7

2.9

22.9

37.3

Minor BPS

78.8

0.9

1.1

79.59

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002877

4000152 - 4012479

12328