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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4001222_4001770_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4001222 - 4001770

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTGAG

5'SS Class:

major

3'SS Sequence:

TTAAATTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGCTTCTTAACA

Flanking Amino Acid:

VLMKNGAEFTDSLISNLLRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

62.5

38.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

79.5

0.66

0.9

73.4

41.2

Minor 5ss

28.8

-2.4

3.1

36.6

41.6

Minor BPS

78.8

0.9

1.1

79.59

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640