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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4002383_4002540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4002383 - 4002540

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGACCA

5'SS Class:

major

3'SS Sequence:

TCTGTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TCAGCTTTCATA

Flanking Amino Acid:

LCRPDNPNIRNMLDEDDVKV

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

65.3

40.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.81

0.8

80.6

31.4

Minor 5ss

31.8

-2.1

32.6

41.5

Minor BPS

49.1

-0

1.8

59.02

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328