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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4002651_4002741_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4002651 - 4002741

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGGTTC

5'SS Class:

major

3'SS Sequence:

GTTGGTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

CTGTTCTTACGT

Flanking Amino Acid:

RQGKQRNSDHRTKKKRRSRS

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

66.9

39.4

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

66.6

0.37

1.1

65.8

45.3

Minor 5ss

47.9

-0.2

3.1

67.7

43.7

Minor BPS

52.4

0.15

70.44

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328