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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4003054_4003347_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4003054 - 4003347

Intron Length:

294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCACCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TCTGTTTCACCT

Flanking Amino Acid:

FGCFVQLEGLRKRWEGLVHI

Intron Amino Acid Position:

263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

77.9

0.63

0.9

70.3

35.4

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

47.4

-0.1

1.9

66.64

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328