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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4004062_4004226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4004062 - 4004226

Intron Length:

165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTGTTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTGGTTTAAAT

Flanking Amino Acid:

SDPEKWEIKQMIAANVLSKE

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

79.5

0.66

0.9

76.9

36.6

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

58.9

0.36

80.63

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328