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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4004315_4004627_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4004315 - 4004627

Intron Length:

313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTATTT

5'SS Class:

major

3'SS Sequence:

TTCTGGATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTTCTGTTAAAG

Flanking Amino Acid:

GILPKVDDEEDEDLEIELVE

Intron Amino Acid Position:

409

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

74.4

36.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

73.3

0.52

0.9

70.3

40.1

Minor 5ss

42.6

-0.8

3.4

64.9

46.4

Minor BPS

51.2

-0.1

2.2

65.72

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328