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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4005169_4005583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4005169 - 4005583

Intron Length:

415

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGCCTG

5'SS Class:

major

3'SS Sequence:

GTTTCTTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

TGATGATGAAAT

Flanking Amino Acid:

NTHWVDPLPDVDGRQIAANM

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

46.3

Major BPS

73.1

0.57

71.9

31.3

Major PPT

84.4

0.77

0.8

77.4

36.9

Minor 5ss

47.7

-0.2

2.8

61.5

44.3

Minor BPS

-0.3

2.1

65.72

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328