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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4005766_4006182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4005766 - 4006182

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TGACCTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAAATTTTAACA

Flanking Amino Acid:

IFRLKEQLIQAVHDNQILIV

Intron Amino Acid Position:

552

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

37.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

75.6

0.58

0.9

73.5

36.8

Minor 5ss

38.2

-1.3

3.3

52.2

38.6

Minor BPS

66.7

0.52

1.2

69.85

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328