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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4006378_4006600_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4006378 - 4006600

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAA

U12 Branch Point Sequence:

TTGTATTCAACT

Flanking Amino Acid:

EEFGCCLGQEVGYTIRFEDC

Intron Amino Acid Position:

617

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

84.7

26.5

Major BPS

0.82

0.8

83.9

25.3

Major PPT

83.5

0.75

0.7

76.7

Minor 5ss

44.1

-0.6

2.9

61.1

43.8

Minor BPS

62.6

0.47

1.7

81.19

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328