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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4006787_4007204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4006787 - 4007204

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGTAG

5'SS Class:

major

3'SS Sequence:

TTTCCTGCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTAAAT

U12 Branch Point Sequence:

AAGACAGTAAAT

Flanking Amino Acid:

TDVLFGLLKKTVQKRQDMKL

Intron Amino Acid Position:

679

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

68.5

38.9

Major BPS

58.4

0.21

1.2

38.7

Major PPT

78.1

0.63

0.8

Minor 5ss

36.1

-1.6

3.2

46.5

48.8

Minor BPS

42.7

-0.4

2.2

59.26

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328