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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4007416_4007691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4007416 - 4007691

Intron Length:

276

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TACTTCCGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TGTGTTTTACTT

Flanking Amino Acid:

VMQIHLTEPPGDILVFLTGQ

Intron Amino Acid Position:

749

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

70.8

0.47

0.9

66.2

35.4

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

53.7

0.19

1.7

71.21

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328