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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4007874_4008390_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4007874 - 4008390

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

GATTACTGAATC

Flanking Amino Acid:

FDPAPPGSRKVVIATNIAET

Intron Amino Acid Position:

810

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

79.6

29.3

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

81.9

0.72

0.9

76.3

37.7

Minor 5ss

40.6

-1.1

2.7

51.2

45.1

Minor BPS

58.2

0.24

1.6

66.89

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328