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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4008532_4008794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4008532 - 4008794

Intron Length:

263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTATCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATCT

Flanking Amino Acid:

DQLVVTPISQAQAKQRAGRA

Intron Amino Acid Position:

857

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.8

86.9

30.1

Major BPS

83.9

0.84

73.9

41.3

Major PPT

83.4

0.75

0.7

82.1

28.6

Minor 5ss

39.9

-1.1

3.1

56.9

47.4

Minor BPS

80.3

1.03

1.4

95.73

30.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328