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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4008951_4009681_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4008951 - 4009681

Intron Length:

731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAC

U12 Branch Point Sequence:

AGTGCTGTAACT

Flanking Amino Acid:

NLASTVLSLKAMGINDLLSF

Intron Amino Acid Position:

909

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

86.9

30.1

Major BPS

62.2

0.3

1.2

38.7

Major PPT

77.6

0.62

0.9

32.6

Minor 5ss

34.8

-1.7

3.2

50.1

46.4

Minor BPS

53.9

0.2

2.1

74.64

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328