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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4009820_4010162_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4009820 - 4010162

Intron Length:

343

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGCTAA

5'SS Class:

major

3'SS Sequence:

ATCTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAA

U12 Branch Point Sequence:

GTACTCTGAAAC

Flanking Amino Acid:

EGLLTRLGRRMAEFPLEPML

Intron Amino Acid Position:

955

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

41.3

Major BPS

69.8

0.49

37.5

Major PPT

86.2

0.81

0.7

81.1

30.2

Minor 5ss

41.3

-1

3.2

49.2

Minor BPS

50.6

-0

1.5

60.07

37.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328