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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4010292_4011206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4010292 - 4011206

Intron Length:

915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

GGATGCATACTT

Flanking Amino Acid:

SVQNVFYRPKDKQALADQKK

Intron Amino Acid Position:

998

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

82.5

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

69.1

0.43

69.2

41.8

Minor 5ss

-1.8

3.3

48.8

Minor BPS

-0.4

2.2

59.33

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328