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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4011404_4011552_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4011404 - 4011552

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAACACA

5'SS Class:

major

3'SS Sequence:

TCTTCTCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAT

U12 Branch Point Sequence:

TTCTCCCTAATT

Flanking Amino Acid:

IRKQMLGIMDRHKLDVVSCG

Intron Amino Acid Position:

1063

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

35.8

Major BPS

69.6

0.49

1.1

69.5

Major PPT

79.5

0.66

0.9

76.8

31.8

Minor 5ss

33.6

-1.9

2.9

40.7

45.3

Minor BPS

73.4

0.81

1.6

88.6

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043752

4000247 - 4012886

12640

ENSAPLT00000002877

4000152 - 4012479

12328