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Intron Name: Anas_platyrhynchos_platyrhynchos_28_401708_489340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

401708 - 489340

Intron Length:

87633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTAAC

U12 Branch Point Sequence:

TCCCGCTTAACC

Flanking Amino Acid:

RALRAPQLLREETTFEAGVK

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

75.3

34.6

Major BPS

59.3

0.23

1.3

63.6

40.3

Major PPT

0.9

0.6

88.2

21.5

Minor 5ss

30.4

-2.2

3.2

42.4

44.3

Minor BPS

60.3

0.3

1.8

67.59

44.2

Associated Gene:

Gene:

ASIC2

Ensembl Gene ID:

ENSAPLG00000009431

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033879

401014 - 510023

109010