Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_4058758_4059338_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4058758 - 4059338

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACTTCCC

5'SS Class:

major

3'SS Sequence:

TTCCATCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

CTTTCCATCACC

Flanking Amino Acid:

AVNLDLTERQVKVWFQNRRM

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.1

56.5

41.1

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

70.1

0.45

0.9

62.1

38.7

Minor 5ss

36.2

-1.6

3.1

45.7

36.1

Minor BPS

59.6

0.28

2.1

75.32

41.4

Associated Gene:

Gene:

MEOX1

Ensembl Gene ID:

ENSAPLG00000017873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046650

4058340 - 4064289

5950