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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4059512_4063172_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4059512 - 4063172

Intron Length:

3661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

GCTTGCCCCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAAAT

U12 Branch Point Sequence:

GTTACTGCAAAT

Flanking Amino Acid:

KTSKRKKENSENQNSSNKAE

Intron Amino Acid Position:

146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

62.1

0.3

1.2

67.3

37.8

Major PPT

66.3

0.37

0.8

62.6

34.6

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

44.8

-0.3

2.2

67.18

43.2

Associated Gene:

Gene:

MEOX1

Ensembl Gene ID:

ENSAPLG00000017873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046650

4058340 - 4064289

5950

ENSAPLT00000017300

4058340 - 4064281

5942