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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4098800_4109388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4098800 - 4109388

Intron Length:

10589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTGGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTCCAC

U12 Branch Point Sequence:

TCTCGTTCCACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

68.8

43.8

Major BPS

49.8

-0

1.4

64.2

Major PPT

69.4

0.44

37.6

Minor 5ss

37.2

-1.4

46.7

48.6

Minor BPS

42.4

-0.6

2.2

55.34

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002731

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002755

4098714 - 4117171

18458