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Intron Name: Anas_platyrhynchos_platyrhynchos_28_4106237_4109829_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
4106237 - 4109829

Intron Length:
3593

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGC|GTGAGTGCG

5'SS Class:
major

3'SS Sequence:
TTTTCACCAACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAC

U12 Branch Point Sequence:
TTTTCACCAACA

Flanking Amino Acid:
EVVPRIHVGNACVRKSAINQ

Intron Amino Acid Position:
41

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.3
0.32
1.3
56.7
42.7

Major BPS
90.1
0.99
0.7
91.6
20.3

Major PPT
76.3
0.59
0.9
71.4
33.3

Minor 5ss
28.5
-2.5
3
28.1
36.2

Minor BPS
55
0.15
2.1
78.29
37.6

Associated Gene:

Gene:
SOST

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4089029 - 4109951
20923

4089029 - 4110226
21198